calcCONS {casesolver} | R Documentation |
A function for calculating conservative LR
calcCONS(mlefitHp, mlefitHd, niter = 2000, delta = 2, quantile = 0.05, seed = NULL, verbose = TRUE, accRateGolden = 0.25, diffTol = 0.1)
mlefitHp |
A fitted object returned from contLikMLE (under Hp) |
mlefitHd |
A fitted object returned from contLikMLE (under Hd) |
niter |
Number of samples in the MCMC-sampling. |
delta |
A numerical parameter to scale with the covariance function Sigma. Default is 2. Should be higher to obtain lower acception rate. |
quantile |
The quantile used to report conservative LR |
seed |
The user can set seed if wanted |
verbose |
Whether progress should be printed |
accRateGolden |
aimed acceptance rate |
diffTol |
Difference tolerance regarding acceptance rate |
The function calculates LR based on MCMC simulations