plotTopEPG {euroformix}R Documentation

plotTopEPG

Description

EPG plotter created by Oskar Hansson.

Usage

plotTopEPG(MLEobj, DCobj = NULL, kitname = NULL, threshT = 0)

Arguments

MLEobj

An object returned from contLikMLE

DCobj

An object returned from devonvolve: Must be run with same object as MLEobj

kitname

Name of kit: "ESX17","ESI17","ESI17Fast","ESX17Fast","Y23","Identifiler","NGM","ESSPlex","ESSplexSE","NGMSElect","SGMPlus","ESX16", "Fusion","GlobalFiler"

threshT

The detection threshold can be shown in gray in the plot.

Details

Plots the expected peak heights of the top genotypes. The peak heights for corresponding alleles (one sample) are superimposed.

Author(s)

Oyvind Bleka


[Package euroformix version 1.11.3 Index]